| Class | Description |
|---|---|
| AlignmentAmbiguityDNACompoundSet |
Extension of
AlignmentAmbiguityDNACompoundSet that also includes the ? character. |
| AlignmentAmbiguityNucleotideCompoundSet |
Extension of
AlignmentAmbiguityRNACompoundSet that also includes the ? character. |
| AlignmentAmbiguityRNACompoundSet |
Extension of
AlignmentAmbiguityRNACompoundSet that also includes the ? character. |
| AmbiguityNoGapDNACompoundSet |
Nucleotide compound set that contains all DNA compounds and ambiguity codes but no gap - character.
|
| AmbiguityNoGapNucleotideCompoundSet |
Nucleotide compound set that contains all DNA and RNA compounds and ambiguity codes
but no gap - character.
|
| AmbiguityNoGapRNACompoundSet |
Nucleotide compound set that contains all RNA compounds and ambiguity codes but no gap - character.
|
| NoGapDNACompoundSet |
Nucleotide compound set that contains all DNA compounds but no gap - character (and without N).
|
| NoGapNucleotideCompoundSet |
Nucleotide compound set that contains all DNA and RNA compounds but no gap - or ambiguity character.
|
| NoGapRNACompoundSet |
Nucleotide compound set that contains all RNA compounds but no gap - character (and without N).
|
| NucleotideCompoundSet |
Same as
NucleotideCompoundSet but also includes the gap character("-"). |