| Package | Description |
|---|---|
| info.bioinfweb.commons.bio.biojava3.core.sequence.compound |
| Modifier and Type | Class and Description |
|---|---|
class |
AlignmentAmbiguityDNACompoundSet
Extension of
AlignmentAmbiguityDNACompoundSet that also includes the ? character. |
class |
AlignmentAmbiguityNucleotideCompoundSet
Extension of
AlignmentAmbiguityRNACompoundSet that also includes the ? character. |
class |
AlignmentAmbiguityRNACompoundSet
Extension of
AlignmentAmbiguityRNACompoundSet that also includes the ? character. |
class |
AmbiguityNoGapDNACompoundSet
Nucleotide compound set that contains all DNA compounds and ambiguity codes but no gap - character.
|
class |
AmbiguityNoGapNucleotideCompoundSet
Nucleotide compound set that contains all DNA and RNA compounds and ambiguity codes
but no gap - character.
|
class |
AmbiguityNoGapRNACompoundSet
Nucleotide compound set that contains all RNA compounds and ambiguity codes but no gap - character.
|
class |
NoGapDNACompoundSet
Nucleotide compound set that contains all DNA compounds but no gap - character (and without N).
|
class |
NoGapNucleotideCompoundSet
Nucleotide compound set that contains all DNA and RNA compounds but no gap - or ambiguity character.
|
class |
NoGapRNACompoundSet
Nucleotide compound set that contains all RNA compounds but no gap - character (and without N).
|
class |
NucleotideCompoundSet
Same as
NucleotideCompoundSet but also includes the gap character("-"). |