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P

PackedIntegerArrayList - Class in info.bioinfweb.commons.collections
Implements a list of packed integer values which can occupy a space between 1 and 63 bits per value depending on the specified constructor parameter.
PackedIntegerArrayList(int, long, long) - Constructor for class info.bioinfweb.commons.collections.PackedIntegerArrayList
Creates a new instance of this class.
packedList - Variable in class info.bioinfweb.commons.collections.PackedPrimitiveWrapperArrayList
 
PackedObjectArrayList<E> - Class in info.bioinfweb.commons.collections
Implements a packed list of objects which uses an underlying instance of PackedIntegerArrayList.
PackedObjectArrayList(int, int) - Constructor for class info.bioinfweb.commons.collections.PackedObjectArrayList
Creates a new instance of this class.
PackedPrimitiveWrapperArrayList<E extends Number> - Class in info.bioinfweb.commons.collections
An adapter class providing access to an instance if PackedIntegerArrayList using the List interface where the element type can be any primitive wrapper class of the Java API, namely Byte, Short, Integer or Long.
PackedPrimitiveWrapperArrayList(int, long, int) - Constructor for class info.bioinfweb.commons.collections.PackedPrimitiveWrapperArrayList
 
paint(Graphics) - Method in class info.bioinfweb.commons.applet.DoubleBufferedApplet
 
paint(TICPaintEvent) - Method in class info.bioinfweb.commons.tic.TICComponent
Painting operations of the implementing class should be performed here, if a toolkit independent painting method is provided.
paint(Graphics) - Method in class info.bioinfweb.commons.tic.toolkit.DefaultSwingComponent
 
paintComponent(Graphics) - Method in class info.bioinfweb.commons.swing.scrollpaneselector.ExtendedScrollPaneSelector
 
paintControl(PaintEvent) - Method in class info.bioinfweb.commons.tic.toolkit.DefaultSWTComposite
 
paintOffscreen(Graphics) - Method in class info.bioinfweb.commons.applet.DoubleBufferedApplet
 
paintPreview(Graphics2D, double) - Method in interface info.bioinfweb.commons.swing.scrollpaneselector.ScrollPaneSelectable
This method is called by ExetededScrollPaneSelector to paint its preview field.
PARAM_OUTPUT_JSP - Static variable in class info.bioinfweb.commons.servlet.Model2Servlet
 
ParameterMap - Class in info.bioinfweb.commons.collections
Class that stores different objects by string keys.
ParameterMap() - Constructor for class info.bioinfweb.commons.collections.ParameterMap
 
parseDouble(String) - Static method in class info.bioinfweb.commons.Math2
Parses a double value which can have either "," or "." as its decimal separator.
parseDouble() - Method in class info.bioinfweb.commons.swing.DecimalInput
Parses the current value of the text field.
parseFloat(String) - Static method in class info.bioinfweb.commons.Math2
Parses a float value which can have either "," or "." as its decimal separator.
parseFloat() - Method in class info.bioinfweb.commons.swing.DecimalInput
Parses the current value of the text field.
parseHeader(HttpServletRequest) - Static method in class info.bioinfweb.commons.servlet.acceptlanguage.AcceptLanguageParser
 
parseHeader(String) - Static method in class info.bioinfweb.commons.servlet.acceptlanguage.AcceptLanguageParser
 
parseInt() - Method in class info.bioinfweb.commons.swing.DecimalInput
Parses the current value as an int.
parseLong() - Method in class info.bioinfweb.commons.swing.DecimalInput
Parses the current value as an long.
parseType(String) - Static method in enum info.bioinfweb.commons.appversion.ApplicationType
Parses a text representation of an application type.
ProgramMainClass - Class in info.bioinfweb.commons
Main classes of applications providing a global Preferences and ApplicationVersion object can be inherited from this class.
ProgramMainClass(ApplicationVersion) - Constructor for class info.bioinfweb.commons.ProgramMainClass
Creates a new instance of this class.
ProgressMonitor - Interface in info.bioinfweb.commons.progress
This interface is used by the repeat finders to report their progress.
propertyChange(PropertyChangeEvent) - Method in class info.bioinfweb.commons.changemonitor.PropertyChangeMonitor
 
PropertyChangeMonitor - Class in info.bioinfweb.commons.changemonitor
This class can be used to assign a ChangeMonitor to an object that accepts PropertyChangeListeners.
PropertyChangeMonitor(String) - Constructor for class info.bioinfweb.commons.changemonitor.PropertyChangeMonitor
Creates a new instance of this class.
put(K, V) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
 
put(String, Action) - Method in class info.bioinfweb.commons.swing.ActionMap
 
putAll(Map) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
 
putAll(K, Collection<V>) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
 
putApplicationLogger(ApplicationLogger) - Method in class info.bioinfweb.commons.log.ApplicationLoggerParameterMap
 
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