- Savable - Interface in info.bioinfweb.commons.io
-
- save() - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- save() - Method in interface info.bioinfweb.commons.io.Savable
-
This method should save the data to a file defined by the path and should call
saveAs() if no path was assigned.
- saveAs() - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- saveAs() - Method in interface info.bioinfweb.commons.io.Savable
-
Promts the user der select a path to save the data.
- saveAs(Component) - Method in interface info.bioinfweb.commons.swing.SwingSavable
-
- saveAs() - Method in class info.bioinfweb.commons.swing.SwingSaver
-
- saveAs(Component) - Method in class info.bioinfweb.commons.swing.SwingSaver
-
- saveDataToFile(File) - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- ScrolledCompositeSyncListener - Class in info.bioinfweb.commons.swt
-
Selection listener that synchronizes
ScrolledComposite
components in horizontal or vertical direction.
- ScrolledCompositeSyncListener(Collection<ScrolledComposite>, boolean) - Constructor for class info.bioinfweb.commons.swt.ScrolledCompositeSyncListener
-
Creates a new instance of this class and registers it as selection listeners at the according scroll bars
of scrolledComposites
.
- ScrolledCompositeSyncListener(ScrolledComposite[], boolean) - Constructor for class info.bioinfweb.commons.swt.ScrolledCompositeSyncListener
-
Creates a new instance of this class.
- ScrollPaneSelectable - Interface in info.bioinfweb.commons.swing.scrollpaneselector
-
Classes implementing this interface are able to paint their own preview thumbnail if they are
positioned inside a JScrollPane
which uses ExetededScrollPaneSelector
.
Although componenets which do not implement this interface can be previewed too, the advantige
of is that the component is able to paint a more sharp preview or to highlight special elements.
- SequenceIntervalList<E> - Class in info.bioinfweb.commons.collections
-
Instances of this class are able to manage a set of sequence intervals (instances of classes implementing
SequenceInterval).
- SequenceIntervalList(SequenceIntervalPositionAdapter<? super E>) - Constructor for class info.bioinfweb.commons.collections.SequenceIntervalList
-
- SequenceIntervalList(SequenceIntervalPositionAdapter<? super E>, int, int) - Constructor for class info.bioinfweb.commons.collections.SequenceIntervalList
-
Creates a new instance of this class.
- SequenceIntervalList.IntervalInformation - Class in info.bioinfweb.commons.collections
-
- SequenceIntervalList.IntervalInformation(int, Comparator<E>) - Constructor for class info.bioinfweb.commons.collections.SequenceIntervalList.IntervalInformation
-
- SequenceIntervalPositionAdapter<T> - Interface in info.bioinfweb.commons.collections
-
- SequenceIntervalPositionAdapterForComparable<T extends Comparable<? super T>> - Class in info.bioinfweb.commons.collections
-
- SequenceIntervalPositionAdapterForComparable() - Constructor for class info.bioinfweb.commons.collections.SequenceIntervalPositionAdapterForComparable
-
- ServletUtils - Class in info.bioinfweb.commons.servlet
-
Utility class for common tasks related to servlets.
- ServletUtils() - Constructor for class info.bioinfweb.commons.servlet.ServletUtils
-
- set(long, long) - Method in class info.bioinfweb.commons.collections.PackedIntegerArrayList
-
Replaces the value at the specified position with the new value.
- set(int, E) - Method in class info.bioinfweb.commons.collections.PackedObjectArrayList
-
- set(int, E) - Method in class info.bioinfweb.commons.collections.PackedPrimitiveWrapperArrayList
-
- setAskToSaveMessageBeginnung(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setAskToSaveMessageEnd(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setAskToSaveTitle(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setBuildNumber(long) - Method in class info.bioinfweb.commons.appversion.ApplicationVersion
-
- setButtonCancel(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setButtonNo(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setButtonYes(String) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setCountry(String) - Method in class info.bioinfweb.commons.servlet.acceptlanguage.AcceptLanguageEntry
-
- setCurrentDirectory(File) - Method in class info.bioinfweb.commons.swing.FileChooserDirModel
-
- setDBDriver(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setDBDriver(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setDBHost(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setDBHost(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setDBName(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setDBName(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setDBPassword(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setDBPassword(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setDBUser(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setDBUser(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setDecimalFormatStr(String) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setDefaultExtension(String) - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- setDefaultExtension(String) - Method in interface info.bioinfweb.commons.io.Savable
-
- setDefaultLocale() - Method in class info.bioinfweb.commons.io.InternationalFileFilter
-
- setDefaultLocale() - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setDefaultName(String) - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- setDefaultName(String) - Method in interface info.bioinfweb.commons.io.Savable
-
Sets the path that should be proposed by the saveAs()-method if no path has been
assigned.
- setEnabled(boolean) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setFile(File) - Method in class info.bioinfweb.commons.io.AbstractSaver
-
- setFile(File) - Method in interface info.bioinfweb.commons.io.Savable
-
Manually assignes a path.
- setFillUp(boolean) - Method in class info.bioinfweb.commons.text.UniqueNameMapParameters
-
- setFillUpChar(char) - Method in class info.bioinfweb.commons.text.UniqueNameMapParameters
-
- setFirstPos(T, int) - Method in interface info.bioinfweb.commons.collections.SequenceIntervalPositionAdapter
-
- setFirstPos(int) - Method in class info.bioinfweb.commons.collections.SimpleSequenceInterval
-
- setFirstPos(SimpleSequenceInterval, int) - Method in class info.bioinfweb.commons.collections.SimpleSequenceIntervalPositionAdapter
-
- setHelpCode(int) - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setHTMLContent(String) - Method in class info.bioinfweb.commons.swing.JHTMLLabel
-
- setIsSubedit(boolean) - Method in class info.bioinfweb.commons.swing.AbstractDocumentEdit
-
Indicates whether this edit is independent or part of another edit.
- setLanguage(String) - Method in class info.bioinfweb.commons.servlet.acceptlanguage.AcceptLanguageEntry
-
- setLastPos(T, int) - Method in interface info.bioinfweb.commons.collections.SequenceIntervalPositionAdapter
-
- setLastPos(int) - Method in class info.bioinfweb.commons.collections.SimpleSequenceInterval
-
- setLastPos(SimpleSequenceInterval, int) - Method in class info.bioinfweb.commons.collections.SimpleSequenceIntervalPositionAdapter
-
- setLocale(Locale) - Method in class info.bioinfweb.commons.io.InternationalFileFilter
-
- setLocale(Locale) - Method in class info.bioinfweb.commons.swing.SwingSaverMessages
-
- setMajor(int) - Method in class info.bioinfweb.commons.io.FormatVersion
-
- setMajorRelease(int) - Method in class info.bioinfweb.commons.appversion.ApplicationVersion
-
- setMaximumFactor(double) - Method in class info.bioinfweb.commons.swing.RelativeRangeModel
-
Sets the current maximum factor and recalculates the maximum.
- setMaxNameLength(int) - Method in class info.bioinfweb.commons.text.UniqueNameMapParameters
-
- setMessage(String) - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setMinor(int) - Method in class info.bioinfweb.commons.io.FormatVersion
-
- setMinorRelease(int) - Method in class info.bioinfweb.commons.appversion.ApplicationVersion
-
- setPatchLevel(int) - Method in class info.bioinfweb.commons.appversion.ApplicationVersion
-
- setPositionAdapter(SequenceIntervalPositionAdapter<? super E>) - Method in class info.bioinfweb.commons.collections.SequenceIntervalList
-
Calling this methods leads to resorting of all elements in the list.
- setPrefix(String) - Method in class info.bioinfweb.commons.io.DefaultNameManager
-
- setProgressValue(double) - Method in interface info.bioinfweb.commons.progress.ProgressMonitor
-
- setProgressValue(double) - Method in class info.bioinfweb.commons.progress.VoidProgressMonitor
-
- setQuality(double) - Method in class info.bioinfweb.commons.servlet.acceptlanguage.AcceptLanguageEntry
-
- setSaveCanceled(boolean) - Method in class info.bioinfweb.commons.swing.FileChooserDirModel
-
If setSaveCanceled(true)
is called the current directory is also updated if the
user cancels the file chooser dialog.
Default value is true
.
- setSelectedItem(Object) - Method in class info.bioinfweb.commons.swing.LocaleComboBoxModel
-
Sets the selected item.
- setSelectedLocale(Locale) - Method in class info.bioinfweb.commons.swing.LocaleComboBoxModel
-
- setSize(double, double) - Method in class info.bioinfweb.commons.graphics.DoubleDimension
-
- setTablePrefix(String) - Method in class info.bioinfweb.commons.sql.sqlproperties.ConcreteSQLProperties
-
- setTablePrefix(String) - Method in interface info.bioinfweb.commons.sql.sqlproperties.SQLProperties
-
- setText(String) - Method in class info.bioinfweb.commons.swing.JHTMLLabel
-
- setTime(Date) - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setTime(long) - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setTimeToNow() - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setType(ApplicationType) - Method in class info.bioinfweb.commons.appversion.ApplicationVersion
-
- setType(ApplicationLoggerMessageType) - Method in class info.bioinfweb.commons.log.ApplicationLoggerMessage
-
- setValue(float) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setValue(double) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setValue(int) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setValue(long) - Method in class info.bioinfweb.commons.swing.DecimalInput
-
- setValue(int) - Method in class info.bioinfweb.commons.swing.RelativeRangeModel
-
Sets the value of this model.
- setWikiHelp(WikiHelp) - Method in class info.bioinfweb.commons.swing.JHTMLLabel
-
- SimpleSequenceInterval - Class in info.bioinfweb.commons.collections
-
- SimpleSequenceInterval(int, int) - Constructor for class info.bioinfweb.commons.collections.SimpleSequenceInterval
-
- SimpleSequenceIntervalFirstPosComparator - Class in info.bioinfweb.commons.collections
-
- SimpleSequenceIntervalFirstPosComparator() - Constructor for class info.bioinfweb.commons.collections.SimpleSequenceIntervalFirstPosComparator
-
- SimpleSequenceIntervalLastPosComparator - Class in info.bioinfweb.commons.collections
-
- SimpleSequenceIntervalLastPosComparator() - Constructor for class info.bioinfweb.commons.collections.SimpleSequenceIntervalLastPosComparator
-
- SimpleSequenceIntervalPositionAdapter - Class in info.bioinfweb.commons.collections
-
- SimpleSequenceIntervalPositionAdapter() - Constructor for class info.bioinfweb.commons.collections.SimpleSequenceIntervalPositionAdapter
-
- size() - Method in class info.bioinfweb.commons.collections.MultiTreeMap
-
- size(K) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
-
- size() - Method in class info.bioinfweb.commons.collections.PackedIntegerArrayList
-
Returns the number of elements currently contained in this list.
- size() - Method in class info.bioinfweb.commons.collections.PackedObjectArrayList
-
- size() - Method in class info.bioinfweb.commons.collections.PackedPrimitiveWrapperArrayList
-
- size() - Method in class info.bioinfweb.commons.collections.SequenceIntervalList
-
- size() - Method in class info.bioinfweb.commons.io.IOProgressListenerVector
-
- size() - Method in class info.bioinfweb.commons.swing.ActionMap
-
- size() - Method in class info.bioinfweb.commons.text.UniqueNameMap
-
- SQL_SET_SEPARATOR - Static variable in class info.bioinfweb.commons.sql.SQLUtils
-
- SQLConnector - Class in info.bioinfweb.commons.sql
-
- SQLConnector() - Constructor for class info.bioinfweb.commons.sql.SQLConnector
-
- SQLProperties - Interface in info.bioinfweb.commons.sql.sqlproperties
-
Classes implementing this interface provide a bean to store information to connect to a SQL database.
- SQLUtils - Class in info.bioinfweb.commons.sql
-
Utility class for common tasks related to SQL operations.
- SQLUtils() - Constructor for class info.bioinfweb.commons.sql.SQLUtils
-
- SQLXMLConstants - Interface in info.bioinfweb.commons.sql.sqlproperties
-
XML constants for the namespace http://bioinfweb.info/xmlns/SQLConnection.
- SQLXMLReader - Class in info.bioinfweb.commons.sql.sqlproperties
-
Reads data necessary to connect to a SQL database.
- SQLXMLReader(QName) - Constructor for class info.bioinfweb.commons.sql.sqlproperties.SQLXMLReader
-
Creates a new instance.
- STABLE_STRING - Static variable in enum info.bioinfweb.commons.appversion.ApplicationType
-
- stateChanged(ChangeEvent) - Method in class info.bioinfweb.commons.swing.SwingChangeMonitor
-
- StringUtils - Class in info.bioinfweb.commons.text
-
Provides general methods to use with character sequences.
- StringUtils() - Constructor for class info.bioinfweb.commons.text.StringUtils
-
- subMap(K, boolean, K, boolean) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
-
- subMap(K, K) - Method in class info.bioinfweb.commons.collections.MultiTreeMap
-
- sum1ToN(int) - Static method in class info.bioinfweb.commons.Math2
-
Returns the sum of all integers from 1 to the specified value.
- SwingChangeMonitor - Class in info.bioinfweb.commons.swing
-
- SwingChangeMonitor() - Constructor for class info.bioinfweb.commons.swing.SwingChangeMonitor
-
- SwingDocumentApplicationLogger - Class in info.bioinfweb.commons.log
-
- SwingDocumentApplicationLogger(Document) - Constructor for class info.bioinfweb.commons.log.SwingDocumentApplicationLogger
-
- SwingSavable - Interface in info.bioinfweb.commons.swing
-
Interface for a SwingSaver.
- SwingSaver - Class in info.bioinfweb.commons.swing
-
Implements the interface Savable with Swing-Dialogs.
- SwingSaver() - Constructor for class info.bioinfweb.commons.swing.SwingSaver
-
- SwingSaver(String) - Constructor for class info.bioinfweb.commons.swing.SwingSaver
-
- SwingSaverMessages - Class in info.bioinfweb.commons.swing
-
- SwingSaverMessages() - Constructor for class info.bioinfweb.commons.swing.SwingSaverMessages
-
- SystemUtils - Class in info.bioinfweb.commons
-
- SystemUtils() - Constructor for class info.bioinfweb.commons.SystemUtils
-
It is unnecessary to create instances of this class.