public class ConsensusSequenceCreator extends Object
Modifier and Type | Method and Description |
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static ConsensusSequenceCreator |
getInstance() |
org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound> |
majorityRuleConsensus(List<? extends org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>> sequences) |
org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound> |
majorityRuleConsensus(org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>[] sequences)
Constructs a majority rule consensus sequence.
|
String |
majorityRuleConsensusAsString(List<? extends org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>> sequences) |
String |
majorityRuleConsensusAsString(org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>[] sequences)
Constructs a majority rule consensus sequence.
|
public static ConsensusSequenceCreator getInstance()
public String majorityRuleConsensusAsString(List<? extends org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>> sequences)
public String majorityRuleConsensusAsString(org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>[] sequences)
sequences
- a set of sequences with equal lengthpublic org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound> majorityRuleConsensus(org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>[] sequences)
sequences
- a set of sequences with equal lengthpublic org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound> majorityRuleConsensus(List<? extends org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>> sequences)