Download version 3.0.0 of bioinfweb.commons.java

You are downloading an older version (3.0.0-658 beta) of bioinfweb.commons.java which was released on 2018-02-04 22:45:00.0 The latest version can be found here.

License

bioinfweb.commons.java is distributed under GNU Lesser General Public License. Copyright (C) 2008-2011, 2013-2018 by Ben Stöver and Sarah Wiechers. This program is distributed in the hope that it will be useful, but without any warranty; without even the implied warranty of merchantability or fitness for a particular purpose. See the GNU Lesser General Public License for more details.

By downloading bioinfweb.commons.java you agree with the License. Please read it carefully.

Note that the releases 1.x were distributed under GNU General Public License instead.

Downloads

Complete download

The complete download contains the classes of all components associated with this release.

Complete binary, sources, docs	bioinfweb.commons.java complete-3.0.0.zip
Complete binary only	bioinfweb.commons.java complete-3.0.0-bin.zip

[Browse source codes] [Browse JavaDoc]

Single component downloads

The following components are associated with version 3.0.0. Components that were updated in this version are shown in bold.

Component	Module binary JAR	Module sources
Core	core-3.0.0.jar	core-3.0.0-source.zip
Applet	applet-1.0.0.jar
Bio	bio-3.0.0.jar	bio-3.0.0-source.zip
Testing	testing-2.0.0.jar
Servlet	servlet-1.0.0.jar
SQL	sql-1.0.0.jar
Swing	swing-3.0.0.jar	swing-3.0.0-source.zip
SWT	swt-2.4.0.jar	swt-2.4.0-source.zip
Experimental	experimental-2.0.0.jar

Subversion

Developers can also check out the source codes directly from the subversion repository under https://secure.bioinfweb.info/Code/svn/commons.java/trunk/main/.

Maven

Developers can use the following code to add dependencies for the modules of bioinfweb.commons.java to their Maven project.

Dependencies

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-core</artifactId>
    <version>3.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-applet</artifactId>
    <version>1.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-bio</artifactId>
    <version>3.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-testing</artifactId>
    <version>2.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-servlet</artifactId>
    <version>1.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-sql</artifactId>
    <version>1.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-swing</artifactId>
    <version>3.0.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-swt</artifactId>
    <version>2.4.0</version>
</dependency>

<dependency>
    <groupId>info.bioinfweb.commons.java</groupId>
    <artifactId>bioinfweb-commons-java-experimental</artifactId>
    <version>2.0.0</version>
</dependency>

Repository

<repository>
    <id>bioinfweb-maven-repo</id>
    <name>bioinfweb repository</name>
    <url>http://bioinfweb.info/MavenRepository/</url>
</repository>

Changes in this version

New release of core
New release of bio
New release of swing
Some changes were considered as API changes and the major version number was therefore increased.

Core

Added remove method in NonOverlappingIntervallList for removing selected parts of a character set. Inherited remove method overwritten to provide consitent behavior.
GenericChangeEvent and GenericEventObject added.
ApplicationLoggerDialog added.

Bio

SequenceUtils.oneLetterAminoAcidConstituents() and threeLetterAminoAcidConstituents() now return an empty array instead of null if a non-ambiguity code is passed. (API change by changed behavior.)

Swing

JTextAreaApplicationLogger SwingDocumentApplicationLogger moved to swing module. (API change)

Other versions

The following links lead you to lists of all releases of the different components.