| Package | Description | 
|---|---|
| info.bioinfweb.commons.collections | 
 Contains extensions to the Java Collections API made for bioinfweb projects that can be of general use. 
 | 
| Modifier and Type | Class and Description | 
|---|---|
class  | 
SequenceIntervalPositionAdapterForComparable<T extends java.lang.Comparable<? super T>>
Abstract implementation of  
SequenceIntervalPositionAdapter to be used with elements that already implement the
 Comparable interface. | 
class  | 
SimpleSequenceIntervalPositionAdapter
Implementation of  
SequenceIntervalPositionAdapter for SimpleSequenceInterval. | 
| Modifier and Type | Method and Description | 
|---|---|
SequenceIntervalPositionAdapter<? super E> | 
SequenceIntervalList.getPositionAdapter()  | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
SequenceIntervalList.setPositionAdapter(SequenceIntervalPositionAdapter<? super E> positionAdapter)
Calling this methods leads to resorting of all elements in the list. 
 | 
| Constructor and Description | 
|---|
SequenceIntervalList(SequenceIntervalPositionAdapter<? super E> positionAdapter)
Equivalent to calling  
SequenceIntervalList(positionAdapter, 
 . | 
SequenceIntervalList(SequenceIntervalPositionAdapter<? super E> positionAdapter,
                    int sequenceLength,
                    int intervalLength)
Creates a new instance of this class. 
 |