public class AlignmentAmbiguityRNACompoundSet extends AmbiguityNoGapRNACompoundSet
AlignmentAmbiguityRNACompoundSet
that also includes the ?
character.Constructor and Description |
---|
AlignmentAmbiguityRNACompoundSet()
Returns a new instance of this class.
|
Modifier and Type | Method and Description |
---|---|
static AlignmentAmbiguityRNACompoundSet |
getAlignmentAmbiguityRNACompoundSet()
Returns a shared instance of this class.
|
getAmbiguityNoGapRNACompoundSet
getNoGapDNACompoundSet
addAmbiguityDNACompounds, addAmbiguityDNARNACompounds, addAmbiguityRNACompounds, newNucleotideCompound
addNucleotideCompound, calculateIndirectAmbiguities, getAmbiguity, isComplementable
addCompound, addCompound, addCompound, addEquivalent, compoundsEqual, compoundsEquivalent, equals, getAllCompounds, getCompoundForString, getEquivalentCompounds, getMaxSingleCompoundStringLength, getStringForCompound, hasCompound, hashCode, isCompoundStringLengthEqual, verifySequence
public AlignmentAmbiguityRNACompoundSet()
public static AlignmentAmbiguityRNACompoundSet getAlignmentAmbiguityRNACompoundSet()